searchindex.js | searchindex.js | |||
---|---|---|---|---|
Search.setIndex({docnames:["acknowledgments","api","bug","common","dependen cies","disk_model","galaxy_parameters","hyperspectral_cube","index","instal l","instruments","line_spread_functions","mcmc","overview","point_spread_fu nctions","table_of_contents","tutorials","under_the_hood"],envversion:{"sph inx.domains.c":2,"sphinx.domains.changeset":1,"sphinx.domains.citation":1," sphinx.domains.cpp":4,"sphinx.domains.index":1,"sphinx.domains.javascript": 2,"sphinx.domains.math":2,"sphinx.domains.python":3,"sphinx.domains.rst":2, "sphinx.domains.std":2,"sphinx.ext.viewcode":1,sphinx:56},filenames:["ackno wledgments.rst","api.rst","bug.rst","common.rst","dependencies.rst","disk_m odel.rst","galaxy_parameters.rst","hyperspectral_cube.rst","index.rst","ins tall.rst","instruments.rst","line_spread_functions.rst","mcmc.rst","overvie w.rst","point_spread_functions.rst","table_of_contents.rst","tutorials.rst" ,"under_the_hood.rst"],objects:{"galpak.GalPaK3D":[[1,2,1,"","create_clean_ cube"],[1,2,1,"","create_convolved_cube"],[1,2,1,"","plot_correlations"],[1 ,2,1,"","plot_geweke"],[1,2,1,"","plot_images"],[1,2,1,"","plot_mcmc"],[1,2 ,1,"","run_mcmc"],[1,2,1,"","save"]],"galpak.GalaxyParameters":[[17,2,1,"", "from_ndarray"],[17,2,1,"","long_info"],[17,2,1,"","short_info"]],"galpak.G aussianLineSpreadFunction":[[17,2,1,"","as_vector"]],"galpak.GaussianPointS preadFunction":[[17,2,1,"","as_image"]],"galpak.HyperspectralCube":[[17,2,1 ,"","defaults_from_instrument"],[17,2,1,"","from_file"],[17,2,1,"","get_ste ps"],[17,2,1,"","has_header"],[17,2,1,"id0","initialize_self_cube"],[17,2,1 ,"","is_empty"],[17,2,1,"","sanitize"],[17,2,1,"","wavelength_of"],[17,2,1, "","write_to"]],"galpak.Instrument":[[17,2,1,"","convolve"]],"galpak.LineSp readFunction":[[17,2,1,"","as_vector"]],"galpak.MUSELineSpreadFunction":[[1 7,2,1,"","as_vector"]],"galpak.MoffatPointSpreadFunction":[[17,2,1,"","as_i mage"]],"galpak.PointSpreadFunction":[[17,2,1,"","as_image"]],galpak:[[17,0 ,1,"","DefaultModel"],[17,0,1,"","DiskModel"],[1,1,1,"","GalPaK3D"],[17,1,1 ,"","GalaxyParameters"],[17,1,1,"","GaussianLineSpreadFunction"],[17,1,1,"" ,"GaussianPointSpreadFunction"],[17,1,1,"","HyperspectralCube"],[17,1,1,"", "Instrument"],[17,1,1,"","LineSpreadFunction"],[17,1,1,"","MCMC"],[17,1,1," ","MUSELineSpreadFunction"],[17,1,1,"","ModelSersic"],[17,1,1,"","MoffatPoi ntSpreadFunction"],[17,1,1,"","PointSpreadFunction"],[1,1,1,"","autorun"],[ 1,1,1,"","run"]]},objnames:{"0":["py","attribute","Python attribute"],"1":[ "py","class","Python class"],"2":["py","method","Python method"]},objtypes: {"0":"py:attribute","1":"py:class","2":"py:method"},terms:{"0":[1,4,5,6,7,8 ,9,10,13,14,15,17],"00":[6,13,17],"000":16,"000000":[6,13,17],"00065":16,"0 0e":[6,13,17],"014":[0,8],"05":16,"055705":16,"056999":16,"05e":16,"06":16, "07":16,"07e":16,"08":16,"0841":16,"09":16,"0_flux1":16,"1":[1,4,5,6,7,8,9, 10,12,13,14,15,17],"10":[1,5,12,13,16,17],"100":[12,17],"10000":16,"1093":[ 5,17],"11":16,"121":16,"125":16,"129":16,"12979890310786":[10,17],"13":16," 14":[4,9,16],"14e":16,"15":[5,12,16,17],"1500":16,"15000":1,"1501":[0,8],"1 57":[5,17],"15e3":16,"16":[12,16,17],"16117":[12,17],"164004":16,"17":16,"1 8":16,"180":1,"180deg":[6,13,17],"183":16,"19":16,"1979":16,"199":16,"1992" :1,"1998":16,"1999apj":1,"1d":[10,11,16,17],"1e":[12,16,17],"2":[1,4,5,6,7, 8,9,10,13,15,17],"20":[1,16],"2008":[5,17],"2009":[1,6,13,16,17],"2009apj": 1,"2011":[6,13,17],"2015":[0,6,8,13,17],"202":16,"21":[1,16],"22":16,"23185 3271026885":[5,17],"236":16,"25":[1,10,16,17],"27":[1,16],"27s_law":[5,17], "2952":[1,16],"2d":[10,11,14,16,17],"2f":16,"2n":1,"2x":16,"3":[1,4,5,6,7,8 ,9,13,15,17],"30":[1,8,9,10,13,16,17],"300":16,"35":16,"37":16,"3726":[5,16 ,17],"3728":[5,16,17],"380m":1,"3d":[1,7,8,10,11,13,16,17],"3e5":16,"3sigma ":16,"3stdev":1,"4":[6,8,13,15,17],"40":[1,16],"41":16,"41e":16,"45":16,"4e ":16,"5":[1,4,5,6,9,12,13,16,17],"50":[1,8,13,16],"500":[1,16],"5000":[1,16 ],"51":16,"518":1,"5369617016":[10,17],"55742040931":[12,17],"57":[10,17]," 5stdev":1,"6":[6,13,17],"60":[1,12,16,17],"618":[6,13,17],"64":16,"65":[6,1 3,17],"6564":[10,17],"66":16,"67":[10,17],"675":16,"6774":[5,17],"68":16,"6 9":16,"693":1,"7":[4,5,6,9,10,13,16,17],"72":16,"73":16,"74":16,"750":1,"75 00":16,"76":16,"77":16,"7786701537924485":[5,17],"8":[4,5,6,9,13,16,17],"80 ":16,"81":16,"822h":1,"83":16,"83616517152367":[5,17],"84":16,"86e":16,"9": [5,6,13,16,17],"90":[12,16,17],"91":16,"92":16,"93":16,"948377":16,"95":[1, 16],"97":16,"99":16,"\u00b5m":[14,16,17],"\u03bb":[7,17],"\u03c7":16,"boole an":[1,7,17],"bouch\u00e9":[8,9],"case":[6,13,17],"class":[1,6,7,8,11,12,13 ,14,15,16],"default":[1,5,7,8,10,11,12,13,14,15,17],"do":[9,10,16,17],"fina l":[1,16],"float":[1,5,6,7,11,13,14,17],"function":[1,4,8,9,10,12,13,15],"g oto":13,"import":[1,5,6,10,12,13,16,17],"int":[1,5,16,17],"new":[13,16],"pu blic":[0,8],"r\u00bd":[6,13,17],"return":[1,6,7,10,11,12,13,14,16,17],"shor t":16,"static":[6,7,13,17],"true":[1,6,7,13,16,17],"try":[1,5,7,13,16,17]," void":[7,17],A:[1,6,7,8,11,15,17],And:[5,10,17],As:[10,11,17],At:1,But:16,B y:[1,16],For:16,IF:1,If:[0,1,2,5,7,8,9,10,12,13,16,17],In:[11,13,14,16,17], Is:[7,17],It:[5,6,7,13,16,17],NOT:[6,13,17],No:[7,17],Not:9,One:13,Or:16,Th e:[1,2,4,5,6,7,8,9,10,12,13,14,16,17],These:[1,11,17],To:[6,13,17],Will:[1, 5,10,17],_3dkernel:1,__call__:[12,17],__init__:[5,16,17],__new__:16,__short s__:16,_chain:[1,16],_convolved_cub:1,_corner:1,_deconvolved_cub:1,_galaxy_ paramet:[1,16],_galaxy_parameters_converg:[1,16],_gewek:[1,16],_imag:1,_ins trument:1,_mcmc:1,_model:1,_obs_flux_map:1,_obs_map:1,_obs_sig_map:1,_obs_v el_map:1,_residuals_cub:1,_run_paramet:1,_stat:1,_true_flux_map:1,_true_map :1,_true_sig_map:1,_true_vel_map:1,aa:16,ab:1,about:16,abov:[1,16],absolut: [1,7,17],accept:[1,8,13,16],acceptance_r:[1,16],access:[6,13,16,17],accesso r:[6,13,17],accord:1,accordingli:[7,17],acknowledg:15,acl:[0,8],activ:[8,15 ],actual:[1,16],ad:[1,6,8,13,15,17],adapt:[1,13],adapt_rang:1,adaptivecauch i:[1,12,17],add:[9,16],addit:[6,13,14,16,17],adequ:16,adjust:[1,8,13],adsab :1,advanc:16,after:[2,10,16,17],again:16,against:[10,17],aj:8,aka:[1,6,13,1 4,16,17],akin:[6,13,17],al:[0,5,6,8,13,17],algorithm:[1,8,12,13,16,17],alia :[5,17],all:[1,6,10,11,13,14,16,17],allow:[12,17],alma:[10,16,17],along:[1, 7,16,17],alpha:[14,16,17],also:[0,1,4,7,8,9,13,16,17],alwai:[1,8,12,13,16,1 7],amplitud:1,an:[1,5,6,7,8,10,12,13,15,17],analysi:[1,8],angl:[6,13,14,17] ,angstrom:[10,16,17],angular:[14,17],ani:[1,7,13,16,17],anoth:[8,15],anti:[ 6,13,14,17],anyth:[7,16,17],anywher:[5,17],ao:13,api:[7,8,15,16,17],appear: 16,appli:[7,10,16,17],applic:[11,17],approach:13,appropri:[10,17],ar:[1,4,6 ,7,9,10,11,12,13,16,17],arcsec:[10,14,17],arcsinh:[5,17],arctan:[5,6,13,16, 17],argument:[11,14,17],aris:[5,17],arithmet:[7,17],around:[1,16],arrai:[1, 6,11,13,16,17],as_imag:[14,16,17],as_tabl:16,as_vector:[11,16,17],ascii:1,a scii_fixedwidth:1,asciit:[4,9,16],ascl:[0,8],aspect:[5,17],assert:[6,13,17] ,assign:[13,16],associ:1,assum:[11,16,17],astro:9,astropi:[1,4,7,9,16,17],a tmospher:[10,17],attempt:[7,17],attent:[10,13,17],attribut:[1,6,13,14,16,17 ],author:2,auto:16,autocomplet:[6,13,17],automat:16,autorun:[1,8,16],autoru n_:16,avail:[1,16],averag:1,axi:[6,7,10,13,14,17],axisymmetr:13,b:[14,17],b a:[10,14,16,17],bad:16,base:[1,8,15],basic:[6,7,13,17],bayesian:[1,8],becau s:16,becom:[5,7,17],been:[4,9,16],befor:[11,17],behav:[7,17],being:[10,17], below:[1,16],benchmark:[4,9],best:[1,13,16],best_parameters_from_chain:16,b eta:[14,16,17],between:[1,7,16,17],beyond:16,bic:1,bigger:1,binnei:[5,17],b latantli:[7,17],blindli:[8,13],bool:[1,6,7,13,17],both:[10,16,17],bottlenec k:[4,9],bouch:[0,6,8,13,17],boundair:16,boundari:[1,8,12,13,15,17],bright:1 6,broadcast:[7,17],bug:[8,15],built:1,bunch:[6,13,16,17],burkert:[5,17],cal culu:[5,17],calibr:[10,16,17],call:[6,12,13,16,17],callback:16,can:[1,2,5,6 ,7,8,10,11,12,13,14,16,17],card:1,carfanta:8,carlo:[1,8,13],cash:[1,16],cas t:[6,13,16,17],cauchi:[1,12,16,17],caus:[12,17],caution:16,cd1_1:[7,17],cd3 _3:[7,17],cdel_3:[7,17],cdelt1:[7,17],cdelt3:[1,7,13,16,17],cdelt:[10,17],c enter:[1,16],central:16,centroid:[11,16,17],chain:[1,8,13,15],chain_fil:16, chain_fract:16,chang:[1,8,10,15,17],characterist:[10,17],chatter:[7,17],che ck:[10,12,13,16,17],chi2:[1,8,15],chi:[1,16],chi_min:[1,16],chi_sort:[1,16] ,chi_stat:[1,16],chock:16,chrome:[11,17],ci:16,cite:[0,8],citeseerx:[1,16], classic:[6,12,13,17],clean:[1,13],clear:[10,17],clockwis:[6,13,14,17],clone :9,close:[13,16],closest:1,cm2:16,coeffici:16,colossu:[5,17],combin:[10,16, 17],come:[2,9],common:[9,14,17],compact:16,compar:13,complet:[13,16],compon :[5,17],compress:1,comput:[1,5,13,14,16,17],compute_best_paramet:16,condit: 13,confid:16,config:[10,17],configur:[1,11,14,17],consid:16,consist:[7,17], constant:[5,17],constrain:13,construct:16,contact:8,contain:[1,16],contini: 8,continuum:16,contribut:9,conveni:[1,5,6,7,13,17],converg:[1,8,13,15],conv ers:16,convert:16,convolut:[1,10,16,17],convolv:[1,10,13,16,17],convolved_c ub:[1,16],coordin:[7,17],copi:[7,16,17],corner:[1,4,9],correct:16,correl:[8 ,15],cosmolog:[5,17],covari:[8,13],creat:[1,6,7,8,11,13,14,15,17],create_cl ean_cub:1,create_convolved_cub:1,cresci:[6,13,17],criteria:1,critial:[13,16 ],crop:[1,16],cross:[8,15],crpix3:[1,7,13,16,17],crpix:[7,10,17],crval3:[1, 7,13,16,17],crval:[7,17],cstat:[1,16],ctype3:1,cube:[1,6,8,10,11,12,15],cub e_1101:16,cube_xy_step:[10,17],cube_z_step:[10,17],cumul:[5,17],cunit1:1,cu nit3:[1,7,11,13,16,17],current:[5,11,16,17],curv:[5,16,17],custom:[8,11,14, 15,17],cylind:[5,17],d:[1,16],d_i:16,dansac:8,dat:[1,16],data:[1,7,8,10,12, 13,16,17],data_record:16,de:[1,6,8,12,13,15,17],de_vaucouleur:[5,17],deconv olut:[1,8,16],deconvolv:16,deconvolved_cub:[1,16],decreas:1,def:16,defaultm odel:[1,5,12,16,17],defaults_from_instru:[7,17],defin:[5,10,17],deg:[6,7,13 ,16,17],degener:[8,13],degre:[14,17],delet:[10,17],deltavir:[5,17],depend:[ 8,15],describ:[11,12,14,16,17],descript:15,detail:[1,16],determin:[1,16],de v:1,develop:[8,15],dfrequenc:[13,16],diagnost:[1,16],dic:1,dict:[5,17],dict ionari:[5,6,13,16,17],diff:1,differ:16,differenti:16,dimens:[7,16,17],dimen sion:[1,8,13],directli:[13,16],directori:[9,16],discret:[7,17],disk:[1,6,8, 13,15,16],disk_dispers:[5,17],diskmodel:[1,5,16,17],diskparamet:[5,17],disp ers:[1,5,6,13,16,17],dispersion_profil:[5,17],displai:[6,13,16,17],distribu t:[1,12,14,16,17],dlamba:[13,16],doc:[7,16,17],doccorelib:[11,17],document: [1,4,6,9,13,16,17],doe:[7,16,17],doi:[1,5,16,17],don:[7,16,17],done:1,doubl et:[5,8,15,17],doubt:2,download:[8,15],dr:[5,17],drop:1,dual:16,due:[6,13,1 7],dummi:16,dure:16,dynesti:[1,12,17],e:[1,13,16],each:[1,10,16,17],earlier :[8,15],easili:[1,6,13,16,17],edg:13,edit:16,edu:[1,16],effect:[6,13,16,17] ,effici:13,eg:[1,5,17],either:[1,16],element:[6,13,17],ellipsi:[14,17],emai l:2,emce:[1,4,9,12,17],emcee_mh:[1,12,17],emcee_nwalk:1,emcee_walk:[1,12,17 ],empir:16,en:[4,5,7,9,14,17],end:16,endless:[7,17],endus:16,enough:13,ensu r:[8,13],entir:16,entri:[0,8],environ:[8,15],equal:16,equival:16,erg:16,err or:16,error_as_percentag:[6,13,17],essenti:[7,17],et:[0,5,6,8,13,17],etc:[1 ,10,13,17],even:[1,6,13,17],everyth:[7,16,17],evolv:[7,17],exampl:[1,6,8,12 ,13,15,17],excit:16,exhaust:[7,17],exist:[1,7,17],exp:[5,6,13,17],expect:[7 ,16,17],experiment:[12,16,17],explicit:[6,13,16,17],explicitli:[11,17],expl or:[7,17],exponenti:[5,16,17],expos:2,extend:[10,12,16,17],extens:[1,12,13, 16,17],extern:[12,17],extnam:[7,17],extract:[1,8],extrud:[11,17],ez:[5,17], factor:16,factori:[6,7,13,17],fals:[1,6,7,13,16,17],fast:[10,16,17],faster: [1,16],featur:[7,17],feedback:16,feel:2,field:[10,16,17],file:[1,2,5,7,8,10 ,13,15,17],filenam:[1,7,16,17],filepath:[1,16],fill:[1,6,7,13,16,17],find:1 6,fine:16,finit:[12,17],first:[5,7,10,16,17],fit:[1,2,5,6,7,10,12,13,16,17] ,fits_standard:[7,17],fix:[7,8,13,15,17],fixed_width:1,fixedwidth:16,flat:[ 6,13,17],flexibl:[7,13,17],flux:[1,5,6,13,16,17],flux_imag:[5,17],flux_prof il:[5,16,17],follow:[1,4,9,11,12,14,16,17],fontsiz:1,for_cub:[11,14,16,17], forc:[1,6,13,17],force_header_upd:1,form:[7,17],format:[1,7,16,17],found:[6 ,8,13,17],fourier:[10,11,17],fr:[9,11,17],fraction:[1,16],free:[2,13],freem an:[5,17],frequenc:[13,16],from:[1,5,6,7,8,9,10,13,14,15,17],from_fil:[7,16 ,17],from_ndarrai:[6,12,13,16,17],fscale:[7,17],full:[1,8,11,12,14,16,17],f ull_chain:1,fulli:[7,17],further:[11,16,17],furthermor:[14,17],futur:[7,13, 16,17],fwhm:[1,10,11,13,14,16,17],g:[1,5,16,17],galaxi:[1,5,6,8,13,15,17],g alaxy_paramet:16,galaxyparamet:[1,6,13,16,17],galaxyparameterserror:[6,13,1 7],galpak3d:[0,5,6,8,9,10,12,13,15,16,17],galpak:[1,2,4,5,6,7,9,10,11,12,13 ,14,15,17],galpak_125_seeing1:16,galpak_cube_1101_from_pap:[5,10,12,16,17], gaussian:[1,5,10,16,17],gaussianfwhm:16,gaussianlinespreadfunct:[11,16,17], gaussianpointspreadfunct:[10,14,16,17],gener:[1,4,9,10,17],genzel:[5,6,13,1 7],get:[7,8,15,16],get_step:[7,17],gewek:[1,16],git:9,github:[1,4,9],gk:[5, 6,10,12,13,16,17],glorifi:[6,13,17],glpk3d:16,go:16,goe:16,good:16,gov:[1,7 ,17],gp:[6,13,16,17],greater:16,gsfc:[1,7,17],guess:[1,7,16,17],h250:[10,17 ],h:[5,8,17],ha:[4,5,7,9,10,12,13,14,16,17],half:[1,6,11,13,14,17],halo:[5, 17],handl:[8,15],hardwar:[10,17],harmoni:[10,17],harvard:1,has_head:[7,17], hast:[1,13],have:[7,16,17],hdu:[7,17],hdu_index:[7,17],header:[1,6,7,8,10,1 5,16,17],heasarc:1,heavili:[7,17],here:[6,8,11,12,13,14,16,17],high:[1,13], higher:[8,13],hold:[1,7,16,17],home:1,hood:[8,15],how:16,html:[1,7,9,11,17] ,http:[0,1,4,5,7,8,9,11,14,16,17],humphrei:[1,16],hyperspectr:[8,15,16],hyp erspectral_imag:[7,17],hyperspectralcub:[1,6,7,10,11,13,14,16,17],i:[1,5,8, 13,16,17],ideal:16,ident:16,ignor:[6,13,17],illeg:[7,17],imag:[1,7,8,10,11, 14,15,17],image_arrai:16,imagepointspreadfunct:16,implement:[1,7,11,12,14,1 6,17],import_chain:16,importantli:13,improv:[4,9],incl:[6,13,16,17],inclin: [6,13,16,17],incomplet:[8,15,16],increas:1,independ:13,index:[6,7,8,13,17], indic:[7,17],infer:16,info:[5,8,10,16,17],inform:13,init:[1,5,16,17],initi: [1,7,16,17],initial_paramet:[1,16],initialize_self_cub:[7,17],input:[1,8,10 ,12,15,17],instal:[8,15],instanc:[1,10,16,17],instanti:[1,6,10,13,16,17],in stead:1,instrum:16,instrument:[1,7,8,11,13,14,15],integ:[7,17],interfac:17, intern:[12,17],interv:[1,16],intrins:[1,13,16],invers:16,invert:[5,17],inve stig:[8,13],io:[1,4,7,9,17],is_empti:[7,17],isnan:[6,13,17],isotherm:[5,16, 17],ist:[1,16],iter:[1,6,13,16,17],its:[1,2,7,10,11,12,16,17],j250:[10,17], johannesbuchn:[4,9],jpg:16,just:16,k250:[10,17],keep:16,kei:16,kernel:[1,16 ],keyword:[7,17],kinemat:[1,8,13,16],km:[6,10,13,16,17],kmo:[10,17],knowled g:13,known_paramet:[1,8,13,16],kpc:[5,17],kwarg:1,l1:16,l2:16,l:[5,8,12,17] ,lamba:[13,16],last:[1,16],last_chain_fract:[1,16],latest:[4,7,9,17],law:13 ,lead:16,leav:16,left:1,length:1,less:[1,10,16,17],level:[8,15],li:[12,17], lib:[5,16,17],librari:[2,9],light:[5,6,7,13,17],like:[1,5,6,7,10,13,16,17], likelihood:[12,17],line:[1,5,6,8,10,13,15],liner:16,linespreadfunct:[10,11, 16,17],link:[0,8],list:[7,16,17],ll:1,ln:[5,12,17],lnprob:[12,17],load:[7,1 7],local:[5,17],log:[1,7,12,16,17],logger:[5,17],logic:16,loglik:[12,17],lo gprior:[12,17],long_info:[6,13,17],longer:[12,17],look:[6,8,13,16,17],lot:1 ,low:1,lower:[8,13],lowercas:[6,13,17],lref:[5,17],lsf:[8,10,11,13,15,17],l sf_fwhm:[10,16,17],lyon1:[9,11,17],m:[1,5,17],m_i:16,made:[10,17],mai:[1,6, 7,11,13,14,16,17],main:1,major:[14,17],make:[2,8,15],manag:[7,17],mandatori :[4,9],manga:[10,17],manual:[1,16],map:[1,5,16,17],margin:[6,13,16,17],mark ov:[1,8,13,15],mass:[5,6,13,17],math:[6,13,17],matplotlib:[4,9],matter:16,m ax:[1,12,13,16,17],max_boundari:[1,16],max_iter:[1,16],max_itr:16,maximum:[ 1,11,14,17],maximum_veloc:[6,13,16,17],maxit:1,mcmc:[1,8,13,15],mcmc_method :[1,12,17],mcmc_sampl:[1,12,17],me:[0,1,8],mean:[1,6,8,15,16,17],measur:[13 ,16],memoiz:[10,17],memori:[10,17],mere:[6,13,17],merg:[13,16],method:[1,5, 6,7,10,12,13,16,17],method_chain:[1,16],metropoli:[1,13],mh:[12,17],michel: 8,micron:[7,17],middl:[11,17],mighel:[1,16],might:[7,10,17],min:[1,12,16,17 ],min_acceptance_r:[1,16],min_boundari:[1,16],minimum:[1,16],minmax:1,miss: 1,mix:[5,6,13,17],mnra:[5,17],mode:[10,17],model:[1,6,7,8,10,11,12,13,14,15 ],model_sersic3d:[5,17],modelcheck:1,modelsers:[1,5,16,17],modifi:16,modul: [4,5,7,9,11,16,17],moffat:17,moffat_distribut:[14,17],moffatpointspreadfunc t:[14,16,17],moment:[7,17],mont:[1,8,13],more:[1,13,16],morpho:8,morpholog: 13,mosaic:1,most:[10,14,16,17],move:[1,7,12,17],mpdaf:[1,4,9,11,13,16,17],m uch:[2,7,17],multi:[1,6,12,13,17],multinest:[1,12,17],multipli:13,muse:[1,7 ,8,10,15,17],muselinespreadfunct:[11,16,17],musenfm:16,musewfm:16,must:[1,1 1,16,17],mutat:[6,7,13,17],my:1,my_chain:16,my_correl:16,my_cub:16,my_dict: 16,my_fil:16,my_galpak_run:16,my_instru:16,my_lsf:16,my_mcmc_plot:16,my_mod el:16,my_muse_cub:[6,13,16,17],my_musenfm_cub:16,my_ndarray_of_data:[6,13,1 6,17],my_output:16,my_param_fil:16,my_plot:16,my_psf:16,my_psf_imag:16,my_r un:[1,16],my_run_chain:16,my_sinfok250_cub:[10,16,17],my_vari:16,mycube_nam :16,mydisk:16,myinstr:[10,17],myinstrument:[1,16],mylin:16,mymcmc:[12,17],m ymodel:[1,5,17],mypsf:[10,17],n:[8,16],n_z:1,name:[1,6,8,13,15,17],nan:[1,6 ,13,17],nasa:[1,7,17],ndarrai:[1,6,7,11,13,14,16,17],need:[11,13,14,16,17], nest:1,net:[0,8],never:[1,8,13],neyman:[1,16],nfw:[5,10,17],nice:[6,13,17], nicola:9,ninterv:1,nois:16,nolinespreadfunct:[10,17],non:[5,13,17],none:[1, 5,6,7,10,12,13,14,16,17],nopointspreadfunct:16,nor:[7,17],normal:[1,12,13,1 6,17],nose:[4,9],note:[1,6,7,13,16,17],noth:[7,10,17],now:[4,9,16],np:16,np ix:16,nsigma:[1,16],number:[1,7,16,17],numer:[6,13,17],numpi:[4,6,7,9,13,17 ],nz:1,obj:[1,13,16],objcub:16,object:[1,6,13,16,17],observ:[1,5,10,13,17], obsolet:[4,9],odd:[1,11,17],off:16,ok:[13,16],old:[1,8,15],onc:16,one:[1,5, 7,8,10,13,16,17],ones:[1,7,17],onli:[1,11,16,17],open:[7,16,17],oper:[7,17] ,optic:13,optim:[10,13,16,17],option:[1,4,6,8,11,12,13,15,16,17],order:[6,7 ,11,13,14,16,17],org:[4,5,7,9,14,17],origin:[1,12,17],osiri:[10,17],other:[ 7,16,17],otherwis:16,output:[1,5,7,8,13,15,17],outsid:[12,16,17],over:13,ov errid:[1,5,16,17],overridden:[10,17],overview:[8,15],overwrit:[1,7,17],own: [7,8,10,11,14,15,17],p:[12,17],pa:[1,6,10,13,14,16,17],packag:[5,17],page:8 ,pai:[10,13,17],paper:[0,8],param:[12,16,17],paramet:[1,5,6,10,11,12,15,17] ,parametr:[8,13],parent:9,part:16,pass:16,path:[7,17],pdf:1,peak:16,pearson :[1,16],per:[8,15],percentag:[6,13,17],percentil:[1,16],perform:[4,9,16],pe rpendicular:[5,17],physic:[6,13,17],pi:[5,17],pick:[7,13,17],pip:9,pix:[6,1 3,17],pixel:[1,6,7,10,13,16,17],pixel_index:[7,17],pixscal:[5,10,17],plain: 1,planck15:[5,17],pleas:[0,2,8,16],plot:[1,8,15],plot_corn:16,plot_correl:[ 1,8,13],plot_gewek:[1,8,16],plot_imag:[1,16],plot_likelihood:1,plot_mcmc:[1 ,8,13,16],plot_obs_vfield:1,plot_true_vfield:1,png:[1,16],point:[1,8,10,15] ,pointspreadfunct:[10,14,16,17],poissonian:16,poorli:16,posit:[1,6,13,14,16 ,17],possibl:[8,13],posteriori:1,practic:[8,15],pre:1,precis:16,prefix:[1,1 6],prepar:[8,15],present:[10,17],primari:[5,17],print:[1,5,6,10,12,13,16,17 ],prior:[12,13,16,17],probabl:[12,17],probe:13,procedur:[7,8,17],process:1, profil:[5,6,13,16,17],project:[2,4,6,9,13,17],proper:16,properli:16,propert i:[6,13,14,16,17],proport:16,propos:[1,12,16,17],provid:[1,5,7,10,11,13,14, 16,17],psf3d:[1,10,16,17],psf3d_fft:[10,17],psf:[1,8,10,11,13,14,15,17],psf _ba:[10,17],psf_fwhm:[10,16,17],psu:[1,16],ptform:[12,17],pull:16,py:[5,16, 17],pycub:[12,17],pyfftw:[4,9],pyfit:[4,9,16],pyloglik:[12,17],pymc3:[1,12, 17],pymc:1,pymultinest:[1,4,9],pypi:[4,9],python3:[5,17],python:[4,9],pytho npath:9,q:[5,17],qsim_v1:[11,17],quadratur:[6,13,17],qualiti:13,quick:[8,15 ],quiet:1,quirk:[10,17],r:[5,16,17],radiu:[5,6,13,16,17],random:[1,8,13,15] ,random_scal:[1,8,13,16],rang:1,rate:[1,8,13,16],ratio:[5,14,16,17],raw:[7, 17],rcparam:1,re:[6,10,13,16,17],reach:[1,13],read:[1,7,8,15,17],reader:16, readthedoc:[4,9],reason:1,recommand:9,recomput:[8,15],recov:[8,15],rectangu lar:[7,17],reddest:[5,17],redshift:[5,16,17],reduc:[1,2,16],reduced_chi:16, refer:[0,1,8],reflect:[10,17],regala:2,regardless:16,region:[7,17],regular: 13,reject:13,rel:[1,7,17],relat:2,remov:[8,13],render:16,replac:1,report:[8 ,15],repositori:9,repr:[6,13,17],repres:[13,16],represent:1,request:16,requ ir:[1,7,11,17],reset:[7,17],residu:[13,16],residuals_cub:[1,16],residuals_m ap:1,rest:[5,16,17],result:[1,13,16],revers:[1,8],right:[11,16,17],rotat:[5 ,14,16,17],rotation_curv:[5,16,17],roughli:13,round:[10,17],routin:1,rscale :1,run:[1,8,9,10,15,17],run_:16,run_mcmc:[1,6,12,13,16,17],run_paramet:1,rv :[5,6,13,16,17],s0:[6,13,17],s:[6,7,10,11,13,14,15,16,17],sai:16,same:[1,13 ,16],sampl:[1,12,13,17],sampler:[12,17],sanit:[7,17],save:[1,5,8,10,15,17], scale:[1,16],schroetter:8,scienc:1,scipi:[4,9],score:[1,16],screen:16,searc h:[1,7,8,17],sech2:[5,17],see:[1,5,6,7,10,11,13,14,16,17],seen:[7,17],selec t:[12,17],self:[7,12,16,17],send:[0,2,8,16],separ:[13,16],sersic:[5,17],ser sic_n:16,sersicn2:[5,17],set:[1,5,7,8,10,13,15,17],setup:[8,15],sever:[12,1 6,17],sf:[10,17],shape:[1,7,11,14,16,17],short_dict:16,short_info:[6,13,17] ,shortcut:16,shorter:16,should:[1,5,7,8,10,11,13,14,16,17],show:[1,16],sig_ o:16,sigma0:[6,13,17],sigma:1,signatur:16,simpi:16,simpl:[5,6,7,13,17],simp lest:16,simpli:[9,11,14,17],simul:[1,5,10,16,17],simultan:13,sinc:[4,9],sin foh250:[10,17],sinfoj250:[10,16,17],sinfok250:[10,16,17],sinfoni:[10,17],si ngl:[6,7,10,13,17],site:[5,11,17],size:[2,13],skip:1,sky:[7,17],slice:[7,17 ],snippet:16,snooker:[12,17],snr:13,so:[6,7,10,13,16,17],some:[7,16,17],som etim:[6,13,17],soon:[10,17],sourc:[1,5,6,7,10,11,12,13,14,17],space:[1,11,1 3,16,17],spano:[5,17],spatial:[5,7,16,17],spec:[7,17],specif:[2,11,17],spec ifi:[1,5,6,7,13,16,17],spectral:[7,10,16,17],spectroscop:[7,17],spectrum:[7 ,17],sphinx:[4,9],spread:[1,8,10,13,15],sqrt:[1,5,17],squar:16,star:16,star t:[7,17],stat:[13,16],statist:[1,8,13,15],statistiqu:1,statit:1,stdev:[1,6, 13,16,17],stdev_i:16,step:[7,16,17],still:[6,12,13,17],stop:1,store:16,stre ss:[8,13],stretchmov:1,string:[1,6,7,11,13,16,17],structur:13,stz1969:[5,17 ],subset:[7,16,17],subtract:16,sugar:16,suit:2,sum:[1,16],sum_z:1,summar:13 ,summari:[1,16],support:[7,8,12,15],sure:[2,16],sweet:16,syntax:[10,17],sys tem:[7,17],t:[7,16,17],tabl:[1,16],take:[1,16],taken:16,tanh:[5,16,17],targ et:1,target_accept:1,target_toler:1,task:[7,17],tell:[11,16,17],term:[6,13, 17],test:[1,2,4,8,9,15],text:1,than:[1,8,13,16],thei:[1,6,13,16,17],them:[1 ,10,11,14,16,17],thi:[1,2,4,5,6,7,9,10,11,12,13,14,16,17],thick:[5,6,13,16, 17],thickness_profil:[5,17],thin:[5,17],third:[10,16,17],thorough:16,throug h:[10,16,17],thu:16,todo:[7,17],tofil:16,tolist:16,too:[1,2],tool:[1,8],tot al:[1,6,13,17],tradit:13,transform:[10,12,16,17],transport:[7,17],tremain:[ 5,17],true_disp_map:[1,16],true_flux_map:[1,16],true_velocity_map:[1,16],tr ust:16,tune:[1,8,15],tupl:1,turbul:[6,13,17],turn:16,turnov:[5,6,13,17],tur nover_radiu:[6,13,16,17],tutori:[8,15],tweak:[8,10,15,17],two:[11,14,16,17] ,txt:[1,5,10,17],typ:[11,17],type:[5,6,7,10,11,13,14,16,17],typic:16,um:[7, 17],unchang:16,undefin:[6,13,17],under:[8,15],understand:[7,17],uniform:[12 ,13,17],uninform:16,unit:[1,4,6,7,9,10,11,12,13,16,17],unittest:[4,9],univ: [9,11,17],unpack:9,unphys:16,unspecifi:[5,17],unsupport:[1,5,12,17],until:1 3,up:[1,6,7,9,13,17],updat:[1,7,16,17],upload:2,upon:[1,4,9,16],urania1:[11 ,17],us:[0,1,4,5,6,7,8,9,10,11,12,13,14,15,17],usag:[7,17],user:[5,12,13,16 ,17],user_manual_psf:[11,17],usr:[5,17],v1:[4,9,16],v2:[5,12,17],v3:[12,17] ,v:[5,16,17],v_max:[6,13,17],valid:16,valu:[1,6,7,8,10,12,13,15,17],variabl :[14,16,17],varianc:[1,7,13,16,17],variou:[7,17],ve:16,vector:[11,16,17],ve loc:[1,5,6,13,16,17],velocity_dispers:[5,6,13,16,17],verbos:[1,7,17],veri:[ 7,17],verif:[7,17],versa:[8,13],version:[1,9,13,16],via:[2,13,16],vice:[8,1 3],view:16,viewdoc:[1,16],virtual:[10,16,17],vmax:[1,5,6,13,16,17],voxel:[7 ,17],w:1,wa:16,wai:16,walk:[1,8,15],walker:[1,12,17],walkerscauchi:[12,17], want:[6,7,9,11,13,14,16,17],warn:16,wave:[5,16,17],wavelength:[7,8,15,16],w avelength_of:[6,7,13,17],we:[1,7,8,11,13,17],well:16,wfm:[10,17],what:16,wh atev:16,when:[1,2,5,6,7,10,11,12,13,16,17],where:[5,16,17],which:[1,2,5,7,1 2,13,16,17],whose:[6,13,17],wide:[10,17],width:[1,11,14,16,17],wiki:[5,7,14 ,17],wikipedia:[5,7,14,17],work:[1,11,13,16,17],wrapper:[6,7,13,17],write:[ 1,7,9,17],write_to:[7,17],written:[13,16],wrong:16,www:[0,8],x2:[5,17],x:[1 ,5,6,7,12,13,14,16,17],xanadu:1,xmax:[7,17],xmin:[7,17],xo:[14,16,17],xsapp endixstatist:1,xspec:1,xy_step:[7,10,14,16,17],y:[1,6,7,13,14,16,17],yet:[7 ,17],yield:[5,10,17],ymax:[7,17],ymin:[7,17],yo:[14,16,17],you:[0,1,2,5,6,7 ,8,9,10,11,12,13,14,16,17],your:[0,1,2,6,8,9,10,11,13,14,15,17],z:[1,6,7,10 ,13,16,17],z_central:[7,14,16,17],z_crop:[1,16],z_cunit:[7,17],z_cunnit:[7, 17],z_step:[7,14,16,17],z_step_km:[10,13,16,17],zero:[1,5,16,17],zmax:[7,17 ],zmin:[7,17],zo:16},titles:["Acknowledgments","<code class=\"xref py py-cl ass docutils literal notranslate\"><span class=\"pre\">GalPaK3D</span></cod e>\u2019s API","Bug reporting","<no title>","Dependencies","Disk Mode ls","Description","Hyperspectral Cube","Welcome to GalPaK\u2019s documentat ion!","Installation","Instruments","Line Spread Functions","MCMC","A quick overview","Point Spread Functions","<no title>","Tutorials Level 0"," Under the hood"],titleterms:{"0":16,"1":16,"2":16,"3":16,"4":16,"class":[5, 10,17],"default":16,"do":8,"function":[11,14,16,17],A:[13,16],acknowledg:[0 ,8],activ:16,ad:16,an:16,anoth:16,api:1,author:8,base:[5,10,17],boundari:16 ,bug:2,chain:16,chang:16,chi2:16,content:8,converg:16,correl:16,creat:16,cr oss:16,cube:[7,13,16,17],custom:16,de:16,depend:[4,9],descript:[6,8,13,17], develop:[4,9],disk:[5,17],document:8,don:8,doublet:16,download:9,earlier:16 ,environ:[4,9],exampl:16,file:16,fix:16,from:16,galaxi:16,galpak3d:1,galpak :[8,16],gaussian:[11,14],get:[6,13,17],handl:[5,10,13,16,17],header:13,hood :17,hyperspectr:[7,17],imag:16,incomplet:13,indic:8,input:[13,16],instal:9, instrument:[10,16,17],interfac:[11,14],level:16,line:[11,16,17],lsf:16,make :16,markov:16,mcmc:[12,16,17],mean:13,model:[5,16,17],moffat:14,muse:[11,16 ],name:16,old:16,option:9,output:16,overview:[13,16],own:16,paramet:[8,13,1 6],per:16,plot:16,point:[14,16,17],practic:16,prepar:16,psf:16,quick:13,ran dom:16,read:16,recomput:16,recov:16,report:2,run:16,s:[1,8],save:16,set:16, setup:9,spread:[11,14,16,17],statist:16,support:[10,13,17],t:8,tabl:8,test: 16,tune:16,tutori:16,tweak:16,under:17,us:16,valu:16,walk:16,wavelength:[6, 13,17],welcom:8,your:16}}) | Search.setIndex({docnames:["acknowledgments","api","bug","common","dependen cies","disk_model","galaxy_parameters","hyperspectral_cube","index","instal l","instruments","line_spread_functions","mcmc","overview","point_spread_fu nctions","table_of_contents","tutorials","under_the_hood"],envversion:{"sph inx.domains.c":2,"sphinx.domains.changeset":1,"sphinx.domains.citation":1," sphinx.domains.cpp":4,"sphinx.domains.index":1,"sphinx.domains.javascript": 2,"sphinx.domains.math":2,"sphinx.domains.python":3,"sphinx.domains.rst":2, "sphinx.domains.std":2,"sphinx.ext.viewcode":1,sphinx:56},filenames:["ackno wledgments.rst","api.rst","bug.rst","common.rst","dependencies.rst","disk_m odel.rst","galaxy_parameters.rst","hyperspectral_cube.rst","index.rst","ins tall.rst","instruments.rst","line_spread_functions.rst","mcmc.rst","overvie w.rst","point_spread_functions.rst","table_of_contents.rst","tutorials.rst" ,"under_the_hood.rst"],objects:{},objnames:{},objtypes:{},terms:{"0":[4,5,6 ,7,8,9,10,13,15,17],"00":[6,13],"000":16,"000000":[6,13],"00065":16,"00e":[ 6,13],"014":[0,8],"05":16,"055705":16,"056999":16,"05e":16,"06":16,"07":16, "07e":16,"08":16,"0841":16,"09":16,"0_flux1":16,"1":[4,5,6,7,8,9,10,12,13,1 5,17],"10":[4,5,9,12,13,16,17],"100":[12,17],"10000":16,"1093":5,"11":16,"1 21":16,"125":16,"129":16,"12979890310786":[10,17],"13":16,"14":[4,9,16],"14 e":16,"15":[5,12,16,17],"1500":16,"15000":[],"1501":[0,8],"157":[5,17],"15e 3":16,"16":[12,16,17],"16117":[12,17],"164004":16,"17":16,"18":16,"180":[], "180deg":[6,13],"183":16,"19":16,"1979":16,"199":16,"1992":[],"1998":16,"19 99apj":[],"1d":16,"1e":[12,16,17],"2":[4,5,6,7,8,9,10,13,15,17],"20":16,"20 08":5,"2009":[6,13,16,17],"2009apj":[],"2011":[6,13,17],"2015":[0,6,8,13,17 ],"202":16,"21":16,"22":16,"231853271026885":[5,17],"236":16,"25":[10,16,17 ],"27":16,"27s_law":5,"2952":16,"2d":[11,16,17],"2f":16,"2n":[],"2x":16,"3" :[4,5,6,7,8,9,13,15],"30":[8,9,10,13,16,17],"300":16,"35":16,"37":16,"3726" :[5,16],"3728":[5,16],"380m":[],"3d":[7,8,11,13,16,17],"3e5":16,"3sigma":16 ,"3stdev":[],"4":[6,8,13,15],"40":16,"41":16,"41e":16,"45":16,"4e":16,"5":[ 4,5,6,9,12,13,16,17],"50":[8,13,16],"500":16,"5000":16,"51":16,"518":[],"53 69617016":[10,17],"55742040931":[12,17],"57":[10,17],"5stdev":[],"6":[4,6,9 ,13],"60":[12,16,17],"618":[6,13],"64":16,"65":[6,13,17],"6564":[10,17],"66 ":16,"67":[10,17],"675":16,"6774":[5,17],"68":16,"69":16,"693":[],"7":[4,5, 6,9,10,13,16,17],"72":16,"73":16,"74":16,"750":[],"7500":16,"76":16,"77":16 ,"7786701537924485":[5,17],"8":[4,5,6,9,13,16,17],"80":16,"81":16,"822h":[] ,"83":16,"83616517152367":[5,17],"84":16,"86e":16,"9":[4,5,6,9,13,16,17],"9 0":[12,16,17],"91":16,"92":16,"93":16,"948377":16,"95":16,"97":16,"99":16," \u00b5m":16,"\u03bb":7,"\u03c7":16,"boolean":7,"bouch\u00e9":[8,9],"case":[ 6,13],"class":[6,7,8,11,12,13,14,15,16],"default":[5,7,8,10,11,12,13,14,15, 17],"do":[9,16],"final":16,"float":[5,6,7,13],"function":[4,8,9,12,13,15]," goto":13,"import":[5,6,10,12,13,16,17],"int":[5,16],"new":[13,16],"public": [0,8],"r\u00bd":[6,13],"return":[6,7,12,13,16,17],"short":16,"static":[6,7, 13],"true":[6,7,13,16,17],"try":[5,7,13,16],"void":7,A:[6,7,8,15,17],And:[5 ,10,17],As:[10,11,17],At:[],But:16,By:16,For:16,IF:[],If:[0,2,5,7,8,9,10,12 ,13,16,17],In:[11,13,14,16,17],Is:7,It:[5,6,7,13,16,17],NOT:[6,13,17],No:7, Not:9,One:13,Or:16,The:[2,4,5,6,7,8,9,10,12,13,16,17],These:[11,17],To:[6,1 3,17],Will:5,_3dkernel:[],__call__:[12,17],__init__:[5,16,17],__new__:16,__ shorts__:16,_chain:16,_convolved_cub:[],_corner:[],_deconvolved_cub:[],_gal axy_paramet:16,_galaxy_parameters_converg:16,_gewek:16,_imag:[],_instrument :[],_mcmc:[],_model:[],_obs_flux_map:[],_obs_map:[],_obs_sig_map:[],_obs_ve l_map:[],_residuals_cub:[],_run_paramet:[],_stat:[],_true_flux_map:[],_true _map:[],_true_sig_map:[],_true_vel_map:[],aa:16,ab:[],about:16,abov:16,abso lut:7,accept:[8,13,16],acceptance_r:16,access:[6,13,16,17],accessor:[6,13,1 7],accord:[],accordingli:7,acknowledg:15,acl:[0,8],activ:[8,15],actual:16,a d:[6,8,13,15,17],adapt:13,adapt_rang:[],adaptivecauchi:[12,17],add:[9,16],a ddit:[6,13,16],adequ:16,adjust:[8,13],adsab:[],advanc:16,after:[2,16],again :16,against:[10,17],aj:8,aka:[6,13,16],akin:[6,13,17],al:[0,5,6,8,13,17],al gorithm:[8,12,13,16,17],alia:5,all:[6,10,11,13,14,16,17],allow:[12,17],alma :[10,16,17],along:[7,16],alpha:16,also:[0,4,7,8,9,13,16],alwai:[8,12,13,16, 17],amplitud:[],an:[5,6,7,8,10,12,13,15,17],analysi:8,angl:[6,13],angstrom: [10,16,17],angular:[],ani:[7,13,16],anoth:[8,15],anti:[6,13],anyth:[7,16],a nywher:5,ao:13,api:[7,8,15,16,17],appear:16,appli:[7,16],applic:[11,17],app roach:13,appropri:[10,17],ar:[4,6,7,9,10,11,12,13,16,17],arcsec:[10,17],arc sinh:5,arctan:[5,6,13,16],argument:[11,14,17],aris:5,arithmet:7,around:16,a rrai:[6,13,16,17],as_imag:16,as_tabl:16,as_vector:16,ascii:[],ascii_fixedwi dth:[],asciit:[4,9,16],ascl:[0,8],aspect:[5,17],assert:[6,13,17],assign:[13 ,16],associ:[],assum:16,astro:9,astropi:[4,7,9,16],atmospher:[10,17],attemp t:7,attent:[10,13,17],attribut:[6,13,16,17],author:2,auto:16,autocomplet:[6 ,13],automat:16,autorun:[8,16],autorun_:16,avail:16,averag:[],axi:[6,7,13], axisymmetr:13,b:[],ba:[10,16,17],bad:16,base:[8,15],basic:[6,7,13],bayesian :8,becaus:16,becom:[5,7],been:[4,9,16],befor:[11,17],behav:7,being:[10,17], below:16,benchmark:[4,9],best:[13,16],best_parameters_from_chain:16,beta:16 ,between:[7,16],beyond:16,bic:[],bigger:[],binnei:5,blatantli:7,blindli:[8, 13],bool:[6,7,13],both:[10,16,17],bottleneck:[4,9],bouch:[0,6,8,13,17],boun dair:16,boundari:[8,12,13,15,17],bright:16,broadcast:7,bug:[8,15],built:[], bunch:[6,13,16],burkert:5,calculu:5,calibr:[10,16,17],call:[6,12,13,16,17], callback:16,can:[2,5,6,7,8,10,11,12,13,14,16,17],card:[],carfanta:8,carlo:[ 8,13],cash:16,cast:[6,13,16],cauchi:[12,16,17],caus:[12,17],caution:16,cd1_ 1:7,cd3_3:7,cdel_3:7,cdelt1:7,cdelt3:[7,13,16],cdelt:[10,17],center:16,cent ral:16,centroid:16,chain:[8,13,15],chain_fil:16,chain_fract:16,chang:[8,15] ,characterist:[10,17],chatter:7,check:[10,12,13,16,17],chi2:[8,15],chi:16,c hi_min:16,chi_sort:16,chi_stat:16,chock:16,chrome:[],ci:16,cite:[0,8],cites eerx:16,classic:[6,12,13,17],clean:13,clear:[],clockwis:[6,13],clone:9,clos e:[13,16],closest:[],cm2:16,coeffici:16,colossu:[5,17],combin:[10,16,17],co me:[2,9],common:[9,14,17],compact:16,compar:13,complet:[13,16],compon:5,com press:[],comput:[5,13,16],compute_best_paramet:16,condit:13,confid:16,confi g:[10,17],configur:[11,14,17],consid:16,consist:7,constant:5,constrain:13,c onstruct:16,contact:8,contain:16,contini:8,continuum:16,contribut:9,conveni :[5,6,7,13,17],converg:[8,13,15],convers:16,convert:16,convolut:16,convolv: [10,13,16,17],convolved_cub:16,coordin:7,copi:[7,16],corner:[4,9],correct:1 6,correl:[8,15],cosmolog:[5,17],covari:[8,13],creat:[6,7,8,11,13,14,15,17], create_clean_cub:[],create_convolved_cub:[],cresci:[6,13,17],criteria:[],cr itial:[13,16],crop:16,cross:[8,15],crpix3:[7,13,16],crpix:[7,10,17],crval3: [7,13,16],crval:7,cstat:16,ctype3:[],cube:[6,8,10,12,15],cube_1101:16,cube_ xy_step:[10,17],cube_z_step:[10,17],cumul:5,cunit1:[],cunit3:[7,13,16],curr ent:[5,16],curv:[5,16],custom:[8,11,14,15,17],cylind:5,d:16,d_i:16,dansac:8 ,dat:16,data:[7,8,10,12,13,16,17],data_record:16,de:[6,8,12,13,15,17],de_va ucouleur:5,deconvolut:[8,16],deconvolv:16,deconvolved_cub:16,decreas:[],def :16,defaultmodel:[5,12,16,17],defaults_from_instru:7,defin:[5,10,17],deg:[6 ,7,13,16],degener:[8,13],degre:[],delet:[],deltavir:[5,17],depend:[8,15],de scrib:[11,12,14,16,17],descript:15,detail:16,determin:16,dev:[],develop:[8, 15],dfrequenc:[13,16],diagnost:16,dic:[],dict:5,dictionari:[5,6,13,16],diff :[],differ:16,differenti:16,dimens:[7,16],dimension:[8,13],directli:[13,16] ,directori:[9,16],discret:7,disk:[6,8,13,15,16],disk_dispers:5,diskmodel:[5 ,16,17],diskparamet:5,dispers:[5,6,13,16,17],dispersion_profil:[5,17],displ ai:[6,13,16],distribut:[12,16,17],dlamba:[13,16],doc:[7,16],doccorelib:[],d ocument:[4,6,9,13,16],doe:[7,16],doi:[5,16],don:[7,16],done:[],doublet:[5,8 ,15],doubt:2,download:[8,15],dr:5,drop:[],dual:16,due:[6,13,17],dummi:16,du re:16,dynesti:[12,17],e:[13,16],each:[10,16,17],earlier:[8,15],easili:[6,13 ,16],edg:13,edit:16,edu:16,effect:[6,13,16,17],effici:13,eg:5,either:16,ele ment:[6,13],ellipsi:[],email:2,emce:[4,9,12,17],emcee_mh:[12,17],emcee_nwal k:[],emcee_walk:[12,17],empir:16,en:[4,5,7,9],end:16,endless:7,endus:16,eno ugh:13,ensur:[8,13],entir:16,entri:[0,8],environ:[8,15],equal:16,equival:16 ,erg:16,error:16,error_as_percentag:[6,13],essenti:7,et:[0,5,6,8,13,17],etc :[10,13,17],even:[6,13],everyth:[7,16],evolv:[7,17],exampl:[6,8,12,13,15,17 ],excit:16,exhaust:[7,17],exist:7,exp:[5,6,13],expect:[7,16],experiment:[12 ,16,17],explicit:[6,13,16],explicitli:[11,17],explor:7,exponenti:[5,16,17], expos:2,extend:[12,16,17],extens:[12,13,16],extern:12,extnam:7,extract:8,ex trud:[11,17],ez:[5,17],factor:16,factori:[6,7,13],fals:[6,7,13,16,17],fast: 16,faster:16,featur:[7,17],feedback:16,feel:2,field:[10,16,17],file:[2,5,7, 8,10,13,15,17],filenam:[7,16],filepath:16,fill:[6,7,13,16],find:16,fine:16, finit:[12,17],first:[5,7,16],fit:[2,5,6,7,10,12,13,16,17],fits_standard:7,f ix:[7,8,13,15],fixed_width:[],fixedwidth:16,flat:[6,13],flexibl:[7,13],flux :[5,6,13,16],flux_imag:5,flux_profil:[5,16,17],follow:[4,9,11,12,14,16,17], fontsiz:[],for_cub:16,forc:[6,13],force_header_upd:[],form:[7,17],format:[7 ,16],found:[6,8,13,17],fourier:[11,17],fr:9,fraction:16,free:[2,13],freeman :5,frequenc:[13,16],from:[5,6,7,8,9,10,13,15,17],from_fil:[7,16],from_ndarr ai:[6,12,13,16,17],fscale:7,full:[8,12,16,17],full_chain:[],fulli:[7,17],fu rther:[11,16,17],furthermor:[14,17],futur:[7,13,16],fwhm:[10,13,16,17],g:[5 ,16],galaxi:[5,6,8,13,15,17],galaxy_paramet:16,galaxyparamet:[6,13,16,17],g alaxyparameterserror:[6,13],galpak3d:[0,5,6,8,9,10,12,13,15,16,17],galpak:[ 2,4,5,6,7,9,10,11,12,13,14,15,17],galpak_125_seeing1:16,galpak_cube_1101_fr om_pap:[5,10,12,16,17],gaussian:[5,10,16,17],gaussianfwhm:16,gaussianlinesp readfunct:16,gaussianpointspreadfunct:[10,16,17],gener:[4,9],genzel:[5,6,13 ,17],get:[7,8,15,16],get_step:7,gewek:16,git:9,github:[4,9],gk:[5,6,10,12,1 3,16,17],glorifi:[6,13,17],glpk3d:16,go:16,goe:16,good:16,gov:7,gp:[6,13,16 ,17],gprior_paramet:[],greater:16,gsfc:7,guess:[7,16],h250:[10,17],h:[5,8,1 7],ha:[4,5,7,9,10,12,13,16,17],half:[6,13],halo:[5,17],handl:[8,15],hardwar :[10,17],harmoni:[10,17],harvard:[],has_head:7,hast:13,have:[7,16],hdu:7,hd u_index:7,header:[6,7,8,10,15,16,17],heasarc:[],heavili:7,here:[6,8,11,12,1 3,14,16,17],high:13,higher:[8,13],hold:[7,16],home:[],hood:[8,15],how:16,ht ml:[7,9],http:[0,4,5,7,8,9,16],humphrei:16,hyperspectr:[8,15,16],hyperspect ral_imag:7,hyperspectralcub:[6,7,13,16,17],i:[5,8,13,16],ideal:16,ident:16, ignor:[6,13],illeg:7,imag:[7,8,11,15,17],image_arrai:16,imagepointspreadfun ct:16,implement:[7,11,12,14,16,17],import_chain:16,importantli:13,improv:[4 ,9],incl:[6,13,16],inclin:[6,13,16],incomplet:[8,15,16],increas:[],independ :13,index:[6,7,8,13,17],indic:7,infer:16,info:[5,8,10,16,17],inform:13,init :[5,16],initi:[7,16],initial_paramet:16,initialize_self_cub:7,input:[8,12,1 5,17],instal:[8,15],instanc:16,instanti:[6,10,13,16,17],instead:[],instrum: 16,instrument:[7,8,11,13,14,15],integ:7,interfac:17,intern:[12,17],interv:1 6,intrins:[13,16],invers:16,invert:5,investig:[8,13],io:[4,7,9],is_empti:7, isnan:[6,13,17],isotherm:[5,16],ist:16,iter:[6,13,16],its:[2,7,10,11,12,16, 17],j250:[10,17],johannesbuchn:[4,9],jpg:16,just:16,k250:[10,17],keep:16,ke i:16,kernel:16,keyword:7,kinemat:[8,13,16],km:[6,10,13,16,17],kmo:[10,17],k nowledg:13,known_paramet:[8,13,16],kpc:[5,17],kwarg:[],l1:16,l2:16,l:[5,8,1 2],lamba:[13,16],last:16,last_chain_fract:16,latest:[4,7,9],law:13,lead:16, leav:16,left:[],length:[],less:[10,16,17],level:[8,15],li:[12,17],lib:[5,16 ,17],librari:[2,9],light:[5,6,7,13],like:[5,6,7,10,13,16,17],likelihood:[12 ,17],line:[5,6,8,13,15],liner:16,linespreadfunct:16,link:[0,8],list:[7,16], ll:[],ln:[5,12],lnprob:[12,17],load:7,local:[5,17],log:[7,12,16,17],logger: [5,17],logic:16,loglik:12,logprior:12,long_info:[6,13],longer:[12,17],look: [6,8,13,16],lot:[],low:[],lower:[8,13],lowercas:[6,13],lref:5,lsf:[8,10,11, 13,15,17],lsf_fwhm:[10,16,17],lyon1:9,m:5,m_i:16,made:[],mai:[6,7,11,13,14, 16,17],main:[],major:[],make:[2,8,15],manag:7,mandatori:[4,9],manga:[10,17] ,manual:16,map:[5,16],margin:[6,13,16],markov:[8,13,15],mass:[5,6,13],math: [6,13,17],matplotlib:[4,9],matter:16,max:[12,13,16,17],max_boundari:16,max_ iter:16,max_itr:16,maximum:[],maximum_veloc:[6,13,16],maxit:[],mcmc:[8,13,1 5],mcmc_method:[12,17],mcmc_sampl:[12,17],me:[0,8],mean:[6,8,15,16,17],meas ur:[13,16],memoiz:[],memori:[],mere:[6,13,17],merg:[13,16],method:[5,6,7,10 ,12,13,16,17],method_chain:16,metropoli:13,mh:[12,17],michel:8,micron:7,mid dl:[],mighel:16,might:7,min:[12,16,17],min_acceptance_r:16,min_boundari:16, minimum:16,minmax:[],miss:[],mix:[5,6,13],mnra:5,mode:[10,17],model:[6,7,8, 10,11,12,13,14,15],model_sersic3d:5,modelcheck:[],modelparamet:[],modelsers :[5,16,17],modifi:16,modul:[4,5,7,9,11,16,17],moffat:17,moffat_distribut:[] ,moffatpointspreadfunct:16,moment:7,mont:[8,13],more:[13,16],morpho:8,morph olog:13,mosaic:[],most:[10,14,16,17],move:[7,12,17],mpdaf:[4,9,11,13,16,17] ,much:[2,7],multi:[6,12,13,17],multinest:[12,17],multipli:13,muse:[7,8,10,1 5,17],muselinespreadfunct:16,musenfm:16,musewfm:16,must:[11,16,17],mutat:[6 ,7,13,17],my:[],my_chain:16,my_correl:16,my_cub:16,my_dict:16,my_fil:16,my_ galpak_run:16,my_instru:16,my_lsf:16,my_mcmc_plot:16,my_model:16,my_muse_cu b:[6,13,16,17],my_musenfm_cub:16,my_ndarray_of_data:[6,13,16],my_output:16, my_param_fil:16,my_plot:16,my_psf:16,my_psf_imag:16,my_run:16,my_run_chain: 16,my_sinfok250_cub:[10,16,17],my_vari:16,mycube_nam:16,mydisk:16,myinstr:[ 10,17],myinstrument:16,mylin:16,mymcmc:12,mymodel:[5,17],mypsf:[10,17],n:[8 ,16],n_z:[],name:[6,8,13,15],nan:[6,13,17],nasa:7,ndarrai:[6,7,13,16,17],ne ed:[11,13,14,16,17],nest:[],net:[0,8],never:[8,13],neyman:16,nfw:[5,10,17], nice:[6,13],nicola:9,ninterv:[],nois:16,nolinespreadfunct:[10,17],non:[5,13 ],none:[5,6,7,10,12,13,16,17],nopointspreadfunct:16,nor:[7,17],normal:[12,1 3,16,17],nose:[4,9],note:[6,7,13,16],noth:7,now:[4,9,16],np:16,npix:16,nsig ma:16,number:[7,16],numer:[6,13],numpi:[4,6,7,9,13,17],nz:[],obj:[13,16],ob jcub:16,object:[6,13,16,17],observ:[5,10,13,17],obsolet:[4,9],odd:[],off:16 ,ok:[13,16],old:[8,15],onc:16,one:[5,7,8,10,13,16,17],ones:7,onli:16,open:[ 7,16],oper:7,optic:13,optim:[13,16],option:[4,6,8,11,12,13,15,16,17],order: [6,7,11,13,14,16,17],org:[4,5,7,9],origin:[12,17],osiri:[10,17],other:[7,16 ],otherwis:16,output:[5,7,8,13,15],outsid:[12,16,17],over:13,overrid:[5,16] ,overridden:[10,17],overview:[8,15],overwrit:7,own:[7,8,10,11,14,15,17],p:[ 12,17],pa:[6,10,13,16,17],packag:[4,5,9,17],page:8,pai:[10,13,17],paper:[0, 8],param:[12,16,17],paramet:[5,6,10,12,15,17],parametr:[8,13],parent:9,part :16,pass:16,path:7,pdf:[],peak:16,pearson:16,per:[8,15],percentag:[6,13],pe rcentil:16,perform:[4,9,16],perpendicular:5,physic:[6,13,17],pi:5,pick:[7,1 3],pip:9,pix:[6,13],pixel:[6,7,10,13,16,17],pixel_index:7,pixscal:[5,10,17] ,plain:[],planck15:[5,17],pleas:[0,2,8,16],plot:[8,15],plot_corn:16,plot_co rrel:[8,13],plot_gewek:[8,16],plot_imag:16,plot_likelihood:[],plot_mcmc:[8, 13,16],plot_obs_vfield:[],plot_true_vfield:[],png:16,point:[8,15],pointspre adfunct:16,poissonian:16,poorli:16,posit:[6,13,16],possibl:[8,13],posterior i:[],practic:[8,15],pre:[],precis:16,prefix:16,prepar:[8,15],present:[10,17 ],primari:5,print:[5,6,10,12,13,16,17],prior:[12,13,16,17],probabl:[12,17], probe:13,procedur:[7,8],process:[],profil:[5,6,13,16],project:[2,4,6,9,13], proper:16,properli:16,properti:[6,13,16],proport:16,propos:[12,16,17],provi d:[5,7,10,11,13,14,16,17],psf3d:16,psf3d_fft:[],psf:[8,10,11,13,14,15,17],p sf_ba:[10,17],psf_fwhm:[10,16,17],psu:16,ptform:12,pull:16,py:[5,16,17],pyc ub:12,pyfftw:[4,9],pyfit:[4,9,16],pyloglik:12,pymc3:[12,17],pymc:[],pymulti nest:[4,9],pypi:[4,9],python3:[5,17],python:[4,9],pythonpath:9,q:[5,17],qsi m_v1:[],quadratur:[6,13,17],qualiti:13,quick:[8,15],quiet:[],quirk:[10,17], r:[5,16],radiu:[5,6,13,16],random:[8,13,15],random_scal:[8,13,16],rang:[],r ate:[8,13,16],ratio:[5,16],raw:7,rcparam:[],re:[6,10,13,16,17],reach:13,rea d:[7,8,15],reader:16,readthedoc:[4,9],reason:[],recommand:9,recomput:[8,15] ,recov:[8,15],rectangular:7,reddest:5,redshift:[5,16,17],reduc:[2,16],reduc ed_chi:16,refer:[0,8],reflect:[],regala:2,regardless:16,region:7,regular:13 ,reject:13,rel:7,relat:2,remov:[8,13],render:16,replac:[],report:[8,15],rep ositori:9,repr:[6,13],repres:[13,16],represent:[],request:16,requir:[7,11,1 7],reset:7,residu:[13,16],residuals_cub:16,residuals_map:[],rest:[5,16],res ult:[13,16],revers:8,right:[11,16,17],rotat:[5,16],rotation_curv:[5,16,17], roughli:13,round:[10,17],routin:[],rscale:[],run:[8,9,10,15,17],run_:16,run _mcmc:[6,12,13,16,17],run_paramet:[],rv:[5,6,13,16],s0:[6,13],s:[6,7,10,13, 15,16,17],sai:16,same:[13,16],sampl:[12,13,17],sampler:[12,17],sanit:7,save :[5,8,10,15,17],scale:16,schroetter:8,scienc:[],scipi:[4,9],score:16,screen :16,search:[7,8],sech2:5,see:[5,6,7,10,13,16,17],seen:7,select:[12,17],self :[7,12,16,17],send:[0,2,8,16],separ:[13,16],sersic:5,sersic_n:16,sersicn2:5 ,set:[5,7,8,10,13,15,17],setup:[8,15],sever:[12,16,17],sf:[],shape:[7,16],s hort_dict:16,short_info:[6,13],shortcut:16,shorter:16,should:[5,7,8,10,13,1 6,17],show:16,sig_o:16,sigma0:[6,13,17],sigma:[],signatur:16,simpi:16,simpl :[5,6,7,13,17],simplest:16,simpli:[9,11,14,17],simul:[5,10,16,17],simultan: 13,sinc:[4,9],sinfoh250:[10,17],sinfoj250:[10,16,17],sinfok250:[10,16,17],s infoni:[10,17],singl:[6,7,10,13,17],site:[5,17],size:[2,13],skip:[],sky:7,s lice:7,snippet:16,snooker:[12,17],snr:13,so:[6,7,13,16,17],some:[7,16],some tim:[6,13],soon:[10,17],sourc:[5,6,7,12,13],space:[11,13,16,17],spano:5,spa tial:[5,7,16],spec:7,specif:[2,11,17],specifi:[5,6,7,13,16,17],spectral:[7, 10,16,17],spectroscop:7,spectrum:7,sphinx:[4,9],spread:[8,13,15],sqrt:5,squ ar:16,star:16,start:7,stat:[13,16],statist:[8,13,15],statistiqu:[],statit:[ ],stdev:[6,13,16],stdev_i:16,step:[7,16],still:[6,12,13,17],stop:[],store:1 6,stress:[8,13],stretchmov:[],string:[6,7,13,16],structur:13,stz1969:5,subs et:[7,16],subtract:16,sugar:16,suit:2,sum:16,sum_z:[],summar:13,summari:16, support:[7,8,12,15],sure:[2,16],sweet:16,syntax:[10,17],system:7,t:[7,16],t abl:16,take:16,taken:16,tanh:[5,16,17],target:[],target_accept:[],target_to ler:[],task:7,tell:[11,16,17],term:[6,13,17],test:[2,4,8,9,15],text:[],than :[8,13,16],thei:[6,13,16],them:[10,11,14,16,17],thi:[2,4,5,6,7,9,11,12,13,1 4,16,17],thick:[5,6,13,16,17],thickness_profil:[5,17],thin:5,third:16,thoro ugh:16,through:16,thu:16,todo:7,tofil:16,tolist:16,too:2,tool:8,total:[6,13 ,17],tradit:13,transform:[12,16],transport:7,tremain:5,true_disp_map:16,tru e_flux_map:16,true_velocity_map:16,trust:16,tune:[8,15],tupl:[],turbul:[6,1 3,17],turn:16,turnov:[5,6,13],turnover_radiu:[6,13,16],tutori:[8,15],tweak: [8,10,15,17],two:[11,14,16,17],txt:[5,10,17],typ:[],type:[5,6,7,10,13,16,17 ],typic:16,um:7,unchang:16,undefin:[6,13,17],under:[8,15],understand:[7,17] ,uniform:[12,13],uninform:16,unit:[4,6,7,9,10,12,13,16,17],unittest:[4,9],u niv:9,unpack:9,unphys:16,unspecifi:5,unsupport:[5,12,17],until:13,up:[6,7,9 ,13],updat:[7,16],upload:2,upon:[4,9,16],urania1:[],us:[0,4,5,6,7,8,9,10,11 ,12,13,14,15,17],usag:7,user:[5,12,13,16,17],user_manual_psf:[],usr:[5,17], v1:[4,9,16],v2:[5,12,17],v3:[12,17],v:[5,16],v_max:[6,13],valid:16,valu:[6, 7,8,10,12,13,15,17],variabl:16,varianc:[7,13,16],variou:7,ve:16,vector:16,v eloc:[5,6,13,16],velocity_dispers:[5,6,13,16,17],verbos:7,veri:[7,17],verif :7,versa:[8,13],version:[9,13,16],via:[2,13,16],vice:[8,13],view:16,viewdoc :16,virtual:[10,16,17],vmax:[5,6,13,16],voxel:7,w:[],wa:16,wai:16,walk:[8,1 5],walker:[12,17],walkerscauchi:[12,17],want:[6,7,9,11,13,14,16,17],warn:16 ,wave:[5,16],wavelength:[7,8,15,16],wavelength_of:[6,7,13,17],we:[7,8,13],w ell:16,wfm:[10,17],what:16,whatev:16,when:[2,5,6,7,10,11,12,13,16,17],where :[5,16],which:[2,5,7,12,13,16,17],whose:[6,13],wide:[10,17],width:16,wiki:[ 5,7],wikipedia:[5,7],work:[13,16],wrapper:[6,7,13],write:[7,9],write_to:7,w ritten:[13,16],wrong:16,www:[0,8],x2:5,x:[5,6,7,12,13,16,17],xanadu:[],xmax :7,xmin:7,xo:16,xsappendixstatist:[],xspec:[],xy_step:[7,10,16,17],y:[6,7,1 3,16,17],yet:[7,17],yield:[5,10,17],ymax:7,ymin:7,yo:16,you:[0,2,5,6,7,8,9, 10,11,12,13,14,16,17],your:[0,2,6,8,9,11,13,14,15,17],z:[6,7,13,16,17],z_ce ntral:[7,16],z_crop:16,z_cunit:7,z_cunnit:7,z_step:[7,16],z_step_km:[10,13, 16,17],zero:[5,16],zmax:7,zmin:7,zo:16},titles:["Acknowledgments","<code cl ass=\"xref py py-class docutils literal notranslate\"><span class=\"pre\">G alPaK3D</span></code>\u2019s API","Bug reporting","<no title>","Depen dencies","Disk Models","Description","Hyperspectral Cube","Welcome to GalPa K\u2019s documentation!","Installation","Instruments","Line Spread Function s","MCMC","A quick overview","Point Spread Functions","<no title>","T utorials Level 0","Under the hood"],titleterms:{"0":16,"1":16,"2":16,"3":16 ,"4":16,"class":[5,10,17],"default":16,"do":8,"function":[11,14,16,17],A:[1 3,16],acknowledg:[0,8],activ:16,ad:16,an:16,anoth:16,api:1,author:8,base:[5 ,10,17],boundari:16,bug:2,chain:16,chang:16,chi2:16,content:8,converg:16,co rrel:16,creat:16,cross:16,cube:[7,13,16,17],custom:16,de:16,depend:[4,9],de script:[6,8,13,17],develop:[4,9],disk:[5,17],document:8,don:8,doublet:16,do wnload:9,earlier:16,environ:[4,9],exampl:16,file:16,fix:16,from:16,galaxi:1 6,galpak3d:1,galpak:[8,16],gaussian:[11,14],get:[6,13,17],handl:[5,10,13,16 ,17],header:13,hood:17,hyperspectr:[7,17],imag:16,incomplet:13,indic:8,inpu t:[13,16],instal:9,instrument:[10,16,17],interfac:[11,14],level:16,line:[11 ,16,17],lsf:16,make:16,markov:16,mcmc:[12,16,17],mean:13,model:[5,16,17],mo ffat:14,muse:[11,16],name:16,old:16,option:9,output:16,overview:[13,16],own :16,paramet:[8,13,16],per:16,plot:16,point:[14,16,17],practic:16,prepar:16, psf:16,quick:13,random:16,read:16,recomput:16,recov:16,report:2,run:16,s:[1 ,8],save:16,set:16,setup:9,spread:[11,14,16,17],statist:16,support:[10,13,1 7],t:8,tabl:8,test:16,tune:16,tutori:16,tweak:16,under:17,us:16,valu:16,wal k:16,wavelength:[6,13,17],welcom:8,your:16}}) | |||
End of changes. 1 change blocks. | ||||
lines changed or deleted | lines changed or added | |||
This html diff was produced by rfcdiff 1.41. The latest version is available from http://tools.ietf.org/tools/rfcdiff/ |